Genetic Code Analysis Toolkit for R - GCAT Conductance package (gcatconductance)
Overview
The Genetic Code Analysis Toolkit (GCAT) conductance package provides some functions to calculate the conductance of a set of tuples (like codons). This can be used to compute a robustness of the genetic code against point mutations.
Reference:
E. Fimmel, M. Gumbel, M. Starman, L. Strüngmann: Computational Analysis of Genetic Code Variations Optimized for the Robustness against Point Mutations with Wobble-Like Effects. Life (2021), 11, 1338. https://doi.org/10.3390/life11121338
GitHub
The source code and installation instructions can be found at the Github repository.
Quicklinks
- A tutorial is online avaible.
- The source code and installation instructions can be found at the Github repository.
Contact: Markus Gumbel