Analysis of Base Composition Toolkit (abcd) - R package

Overview

The abcd package is an R package for the analysis of so called n-plets and is the software used in: Elena Fimmel, Ali Karpuzoglu, Markus Gumbel, Sergey Petoukhov: On comparing composition principles of long DNA sequences with those of random ones. https://doi.org/10.1016/j.biosystems.2019.04.003

GitHub

The source code and installation instructions can be found at the Github repository.

Quicklinks

Download the latest version: 

Here is the user's manual. The source code and installation instructions can be found at the Github repository.

Contact: Markus Gumbel